Blast Web Service를 제공하는 DDBJ, EBI와 내가 만든 Blast의 총 3개에 대하여 blastp, swissprot 데이터베이스, 서열(>gi|2501594|sp|Q57997|Y577_METJA PROTEIN MJ0577)에 대해서 Blast를 수행한 결과입니다. 결과는 당연히 똑같아야 하겠지만, Blast의 버전이 제가 2.2.14 버전으로 좀 낮고 swissprot데이터베이스는 DDBJ가 좀 틀리네요 ^^ 각각의 Blast 결과를 보시려면 more를 클릭하세요^^;;
========================================== ===========DDBJ BLAST with SWISS Prot=========== ==========================================
BLASTP 2.2.15 [Oct-15-2006]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= querya (162 letters)
Database: SWISS: SWISS sequence taken from the header [Last update Aug/02/2007] 276,256 sequences; 101,466,996 total letters
Score E Sequences producing significant alignments: (bits) Value
sp|Q57997|Y577_METJA Uncharacterized protein MJ0577. 311 9e-85 sp|Q57951|Y531_METJA Uncharacterized protein MJ0531. 91 2e-18 sp|P42297|YXIE_BACSU Uncharacterized protein yxiE precursor. 75 8e-14 sp|Q50777|YB54_METTM Uncharacterized protein ORF143 in mtr region. 65 8e-11 sp|P73475|Y1230_SYNY3 Uncharacterized protein slr1230. 62 7e-10 sp|O27222|Y1154_METTH Uncharacterized protein MTH_1154. 59 8e-09
========================================== ===========NGRI BLAST with SWISS Prot=========== ==========================================
BLASTP 2.2.14 [May-07-2006]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: swissprot 276,256 sequences; 101,466,206 total letters
Searching
Query= gi|2501594|sp|Q57997|Y577_METJA PROTEIN MJ0577 (162 letters)
Score E Sequences producing significant alignments: (bits) Value
Q57997|Y577_METJA Uncharacterized protein MJ0577 - Methanococcus... 311 9e-85 Q57951|Y531_METJA Uncharacterized protein MJ0531 - Methanococcus... 91 2e-18 P42297|YXIE_BACSU Uncharacterized protein yxiE precursor - Bacil... 75 8e-14 Q50777|YB54_METTM Uncharacterized protein ORF143 in mtr region -... 65 8e-11 P73475|Y1230_SYNY3 Uncharacterized protein slr1230 - Synechocyst... 62 7e-10 O27222|Y1154_METTH Uncharacterized protein MTH_1154 - Methanobac... 59 8e-09
========================================== ===========EBI BLAST with SWISS Prot=========== ==========================================
BLASTP 2.2.15 [Oct-15-2006]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Sequence (162 letters)
Database: swissprot 276,256 sequences; 101,466,206 total letters
