Hadoop for Bioinformatics

간단히 정리하려고 쌓아두고 있었는데, 당췌 시간이 나질 않아서 우선 제목과 URL만 주욱 나열합니다. 추후 어떠한 방식으로 어떻게 Hadoop을 응용해서 사용하는지에 대해서 포스팅 할 계획입니다. 그전에 우선!!! :)

Summarizing next-gen sequencing variation statistics with Hadoop using Cascalog
http://bcbio.wordpress.com/2011/07/04/summarizing-next-gen-sequencing-variation-statistics-with-hadoop-using-cascalog/

Hadoop: intervals and JOIN
http://stackoverflow.com/questions/1832103/hadoop-intervals-and-join

Hadoop: genomic segments and JOIN
http://biostar.stackexchange.com/questions/8821/hadoop-genomic-segments-and-join

Sorting and Joining some Genotypes with Hadoop
http://plindenbaum.blogspot.com/2011/06/sorting-and-joining-some-genotypes-with.html

Sequence Alignment Map Quality Assurance (SAMQA) hadoop toolkit for validating quality of ngs data
http://informatics.systemsbiology.net/informatics/project/samqa